1AGGA

The solution structure of omega-aga-ivb, a p-type calcium channel antagonist from the venom of agelenopsis aperta
Cysteine knot
Loop Piercing
view details
4-c-12-b-25-c-20 19-b-36
Chain Sequence
EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGLSFA
sequence length 48
structure length 48
publication title The solution structure of omega-Aga-IVB, a P-type calcium channel antagonist from venom of the funnel web spider, Agelenopsis aperta.
pubmed doi rcsb
molecule tags Neurotoxin
molecule keywords OMEGA-AGATOXIN-IVB
ec nomenclature
pdb deposition date 1995-11-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.40.10 Few Secondary Structures Irregular Omega-AgatoxinV Omega-AgatoxinV 1aggA00
1VTXA 1OAVA 1OMBA 1OAWA 1QDPA 2ROOA 1IVAA 1AGGA 1G9PA 1OMAA
chains in the KnotProt database with same CATH superfamily
2DCWA 1VTXA 1OAVA 1OMBA 1OAWA 2DCVA 1CIXA 1QDPA 2ROOA 1IVAA 1AGGA 1G9PA 1OMAA
chains in the KnotProt database with same CATH topology
2DCWA 1VTXA 1OAVA 1OMBA 1OAWA 2DCVA 1CIXA 1QDPA 2ROOA 1IVAA 1AGGA 1G9PA 1OMAA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1VTX A;  1OAV A;  1OMB A;  1OAW A;  1QDP A;  2ROO A;  1IVA A;  1AGG A;  1G9P A;  1OMA A; 
#chains in the KnotProt database with same CATH topology
 2DCW A;  1VTX A;  1OAV A;  1OMB A;  1OAW A;  2DCV A;  1CIX A;  1QDP A;  2ROO A;  1IVA A;  1AGG A;  1G9P A;  1OMA A; 
#chains in the KnotProt database with same CATH homology
 2DCW A;  1VTX A;  1OAV A;  1OMB A;  1OAW A;  2DCV A;  1CIX A;  1QDP A;  2ROO A;  1IVA A;  1AGG A;  1G9P A;  1OMA A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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