| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-223 | 172 | 224-463 | 1-34 | 35-51 | 34 | 239 | slipknot | ||
| view details |
 |
41 | 30-263 | 234 | 1-29 | 308-463 | 264-307 | 29 | 156 | slipknot |
Chain Sequence |
EARSLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYLRPIG
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 24-257 | 234 | 1-23 | 273-463 | 258-272 | 23 | 191 | slipknot | ||
| view details |
|
3.2 | 23-272 | 250 | 1-22 | 294-463 | 273-293 | 22 | 170 | slipknot | ||
| view details |
 |
4.1 | 32-283 | 252 | 1-5, 302-463 | 6-31, 284-301 | 5 | 162 | slipknot | |||
| view details |
|
3.2 | 32-301 | 270 | 1-5, 307-463 | 6-31, 302-306 | 5 | 157 | slipknot | |||
| view details |
|
3.2 | 33-280 | 248 | 1-22, 300-463 | 23-32, 281-299 | 22 | 164 | slipknot | |||
| view details |
|
4.1 | 33-299 | 267 | 1-31, 302-463 | 32-32, 300-301 | 31 | 162 | slipknot | |||
| view details |
|
3.2 | 32-274 | 243 | 1-22, 280-463 | 23-31, 275-279 | 22 | 184 | slipknot | |||
| view details |
|
3.2 | 32-279 | 248 | 1-22, 281-463 | 23-31, 280-280 | 22 | 183 | slipknot | |||
| view details |
 |
2.3 | 35-258 | 224 | 1-23, 270-463 | 24-34, 259-269 | 23 | 194 | slipknot | |||
| view details |
 |
2.1 | 56-222 | 167 | 1-29, 248-463 | 30-55, 223-247 | 29 | 216 | slipknot | |||
| view details |
|
2.1 | 59-310 | 252 | 311-463 | 1-29 | 30-58 | 29 | 152 | slipknot | ||
| view details |
 |
1.1 | 49-217 | 169 | 1-35, 223-463 | 36-48, 218-222 | 35 | 241 | slipknot | |||
| view details |
|
1.1 | 59-251 | 193 | 1-40, 266-463 | 41-58, 252-265 | 40 | 198 | slipknot |
| sequence length |
463
|
| structure length |
463
|
| publication title |
Structure and Molecular Mechanism of a Nucleobase-Cation-Symport-1 Family Transporter.
pubmed doi rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
MHP1
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 182
|
| ec nomenclature | |
| pdb deposition date | 2008-09-11 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
