| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 51-227 | 177 | 228-465 | 1-37 | 38-50 | 37 | 237 | slipknot | ||
| view details |
 |
41 | 34-265 | 232 | 1-33 | 308-465 | 266-307 | 33 | 158 | slipknot |
Chain Sequence |
IEEARSLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYLRPIG
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 28-261 | 234 | 1-27 | 284-465 | 262-283 | 27 | 182 | slipknot | ||
| view details |
 |
4.1 | 24-283 | 260 | 1-23 | 301-465 | 284-300 | 23 | 165 | slipknot | ||
| view details |
|
4.1 | 24-300 | 277 | 1-23 | 303-465 | 301-302 | 23 | 163 | slipknot | ||
| view details |
|
4.1 | 27-291 | 265 | 1-26 | 306-465 | 292-305 | 26 | 160 | slipknot | ||
| view details |
|
4.1 | 26-305 | 280 | 1-25 | 307-465 | 306-306 | 25 | 159 | slipknot | ||
| view details |
|
3.2 | 27-306 | 280 | 1-26 | 310-465 | 307-309 | 26 | 156 | slipknot | ||
| view details |
|
3.2 | 26-309 | 284 | 1-25 | 312-465 | 310-311 | 25 | 154 | slipknot | ||
| view details |
|
3.2 | 32-291 | 260 | 1-26, 306-465 | 27-31, 292-305 | 26 | 160 | slipknot | |||
| view details |
|
3.2 | 30-306 | 277 | 1-26, 310-465 | 27-29, 307-309 | 26 | 156 | slipknot | |||
| view details |
|
3.2 | 40-277 | 238 | 1-31, 295-465 | 32-39, 278-294 | 31 | 171 | slipknot | |||
| view details |
 |
2.1 | 55-307 | 253 | 1-32, 348-465 | 33-54, 308-347 | 32 | 118 | slipknot | |||
| view details |
 |
1.1 | 51-252 | 202 | 1-34, 269-465 | 35-50, 253-268 | 34 | 197 | slipknot | |||
| view details |
|
2.1 | 60-359 | 300 | 360-465 | 1-34 | 35-59 | 34 | 105 | slipknot | ||
| view details |
|
2.1 | 58-220 | 163 | 1-35, 248-465 | 36-57, 221-247 | 35 | 218 | slipknot | |||
| view details |
|
1.1 | 43-217 | 175 | 1-37, 221-465 | 38-42, 218-220 | 37 | 245 | slipknot | |||
| view details |
|
1.1 | 46-248 | 203 | 1-39, 253-465 | 40-45, 249-252 | 39 | 213 | slipknot | |||
| view details |
|
1.1 | 54-252 | 199 | 1-50, 269-465 | 51-53, 253-268 | 50 | 197 | slipknot | |||
| view details |
|
1.1 | 48-248 | 201 | 1-45, 253-465 | 46-47, 249-252 | 45 | 213 | slipknot | |||
| view details |
|
2.1 | 49-248 | 200 | 1-47, 253-465 | 48-48, 249-252 | 47 | 213 | slipknot |
| sequence length |
465
|
| structure length |
465
|
| publication title |
Molecular Basis of Alternating Access Membrane Transport by the Sodium-Hydantoin Transporter Mhp1.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
HYDANTOIN TRANSPORT PROTEIN
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 114
|
| ec nomenclature | |
| pdb deposition date | 2010-02-25 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
