3HFXA

Crystal structure of carnitine transporter
Slipknot S +31 41 +31
Knot core rangeKnot core lengthKnot tails rangeSlipknot tails rangeSlipknot loops rangeN-end lengthC-end lengthType
view details
+31 128-319 192 320-493 1-91 92-127 91 173 slipknot
view details
41 87-354 268 1-86 410-493 355-409 86 84 slipknot
Chain Sequence
PKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
sequence length 493
structure length 493
publication title Crystal structure of the carnitine transporter and insights into the antiport mechanism
pubmed doi rcsb
molecule tags Transport protein
molecule keywords L-carnitine/gamma-butyrobetaine antiporter
source organism Escherichia coli
ec nomenclature
pdb deposition date2009-05-13
KnotProt deposition date2014-07-31

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
A PF02028 BCCTBCCT family transporter
Image from the rcsb pdb (www.rcsb.org)
2WSWA 4M8JA 3HFXA 2WSXA
similar chains in the KnotProt database (40% sequence similarity)
2WSXB 2WSXC
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 2WSW A;  4M8J A;  3HFX A;  2WSX A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 2WSX B;  2WSX C; 
           

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling