| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 41-262 | 222 | 263-504 | 1-21 | 22-40 | 21 | 241 | slipknot | ||
| view details |
 |
41 | 15-294 | 280 | 1-14 | 351-504 | 295-350 | 14 | 154 | slipknot |
Chain Sequence |
VKREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKASVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSAHLVMFLNKSLDEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWARE------EETHWTVWITRFYIIGLFLFLTFLVFLAER
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 14-291 | 278 | 1-13 | 304-498 | 292-303 | 13 | 195 | slipknot | ||
| view details |
 |
4.1 | 11-304 | 294 | 1-10 | 313-498 | 305-312 | 10 | 186 | slipknot | ||
| view details |
|
4.1 | 6-314 | 309 | 1-5 | 321-498 | 315-320 | 5 | 178 | slipknot | ||
| view details |
|
3.2 | 17-337 | 321 | 1-3, 352-498 | 4-16, 338-351 | 3 | 147 | slipknot | |||
| view details |
|
4.1 | 11-329 | 319 | 1-4, 335-498 | 5-10, 330-334 | 4 | 164 | slipknot | |||
| view details |
 |
1.1 | 25-276 | 252 | 1-19, 286-498 | 20-24, 277-285 | 19 | 213 | slipknot | |||
| view details |
 |
2.1 | 36-416 | 381 | 1-20, 458-498 | 21-35, 417-457 | 20 | 41 | slipknot | |||
| view details |
|
2.1 | 34-259 | 226 | 1-21, 275-498 | 22-33, 260-274 | 21 | 224 | slipknot | |||
| view details |
|
2.1 | 44-358 | 315 | 1-21, 402-498 | 22-43, 359-401 | 21 | 97 | slipknot | |||
| view details |
|
2.1 | 45-413 | 369 | 414-498 | 1-22 | 23-44 | 22 | 84 | slipknot | ||
| view details |
|
1.1 | 42-250 | 209 | 1-26, 259-498 | 27-41, 251-258 | 26 | 240 | slipknot | |||
| view details |
|
1.1 | 42-258 | 217 | 1-26, 262-498 | 27-41, 259-261 | 26 | 237 | slipknot | |||
| view details |
|
1.1 | 42-261 | 220 | 1-33, 263-498 | 34-41, 262-262 | 33 | 236 | slipknot | |||
| view details |
|
1.1 | 43-278 | 236 | 1-28, 295-498 | 29-42, 279-294 | 28 | 204 | slipknot | |||
| view details |
|
1.1 | 42-294 | 253 | 1-28, 297-498 | 29-41, 295-296 | 28 | 202 | slipknot | |||
| view details |
|
1.1 | 43-252 | 210 | 1-41, 260-498 | 42-42, 253-259 | 41 | 239 | slipknot | |||
| view details |
 |
3.1 | 40-270 | 231 | 1-34, 278-498 | 35-39, 271-277 | 34 | 221 | slipknot | |||
| view details |
|
2.1 | 45-264 | 220 | 1-37, 277-498 | 38-44, 265-276 | 37 | 222 | slipknot | |||
| view details |
|
2.1 | 45-276 | 232 | 1-37, 279-498 | 38-44, 277-278 | 37 | 220 | slipknot |
| sequence length |
504
|
| structure length |
498
|
| publication title |
Binding of an octylglucoside detergent molecule in the second substrate (S2) site of LeuT establishes an inhibitor-bound conformation
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Transporter
|
| source organism |
Aquifex aeolicus
|
| missing residues |
469-474
|
| total genus |
 Genus: 192
|
| ec nomenclature | |
| pdb deposition date | 2009-03-08 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00209 | SNF | Sodium:neurotransmitter symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
