| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
-31 | 191-259 | 69 | 1-190, 260-392 | 190 | 133 | knot |
Chain Sequence |
YEWGVRSTRKSEPPPLDRVYEIPGLEPITFAGKMHFVPWLARPIFPPWDRGYKDPRFYRSPPLHEHPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEGLPEKVLSLVD--------QDECVLNVISHARLWQTTEEIPKRETYCPVIVDNLIQLCKSQILKHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHECNIYDVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGNDAKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDGVKNLAWV---DSDQLLYQHFWCLPVIVEPVGPVGFKP-----ETFRKFLALYLHGA
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
2.1m | 75-363 | 289 | 1-74, 364-376 | 74 | 13 | knot | |||
| view details |
|
2.1m | 179-306 | 128 | 1-171, 315-376 | 172-178, 307-314 | 171 | 62 | slipknot | |||
| view details |
|
2.1m | 180-334 | 155 | 335-376 | 1-171 | 172-179 | 171 | 41 | slipknot | ||
| view details |
|
2.1m | 185-263 | 79 | 1-175, 283-376 | 176-184, 264-282 | 175 | 94 | slipknot |
| sequence length |
392
|
| structure length |
376
|
| publication title |
Structure of the large ribosomal subunit from human mitochondria.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
16S rRNA
|
| missing residues |
112-119, 336-338, 363-367
|
| total genus |
 Genus: 67
|
| ec nomenclature | |
| pdb deposition date | 2014-08-26 |
| KnotProt deposition date | 2014-10-15 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
