| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 20-258 | 239 | 1-19, 259-493 | 19 | 235 | knot |
Chain Sequence |
ITPVTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGPEVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSIRGDFERQAGNVLQRLQRDPERDIYHTDNW----------GDCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNH
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 18-298 | 281 | 1-17, 299-483 | 17 | 185 | knot | ||||
| view details |
 |
3.2m | 17-255 | 239 | 1-16 | 264-483 | 256-263 | 16 | 220 | slipknot | ||
| view details |
|
4.1 | 8-263 | 256 | 1-7 | 269-483 | 264-268 | 7 | 215 | slipknot | ||
| view details |
|
3.2m | 18-264 | 247 | 1-17 | 274-483 | 265-273 | 17 | 210 | slipknot | ||
| view details |
|
3.2m | 18-273 | 256 | 1-17 | 276-483 | 274-275 | 17 | 208 | slipknot | ||
| view details |
|
3.2m | 18-278 | 261 | 1-17 | 298-483 | 279-297 | 17 | 186 | slipknot | ||
| view details |
|
4.1 | 21-295 | 275 | 1-13, 442-483 | 14-20, 296-441 | 13 | 42 | slipknot | |||
| view details |
 |
3.2 | 22-295 | 274 | 1-20, 441-483 | 21-21, 296-440 | 20 | 43 | slipknot | |||
| view details |
|
|
3.2 | 21-441 | 421 | 1-17, 445-483 | 18-20, 442-444 | 17 | 39 | slipknot | ||
| view details |
|
|
3.2 | 21-444 | 424 | 445-483 | 1-17 | 18-20 | 17 | 38 | slipknot |
| sequence length |
493
|
| structure length |
483
|
| publication title |
Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
pubmed doi rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Bacteriophytochrome
|
| source organism |
Pseudomonas aeruginosa
|
| missing residues |
393-402
|
| total genus |
 Genus: 143
|
| ec nomenclature |
ec
2.7.13.3: Histidine kinase. |
| pdb deposition date | 2010-06-25 |
| KnotProt deposition date | 2014-08-20 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00360 | PHY | Phytochrome region |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
