3OC3A

Crystal structure of the mot1 n-terminal domain in complex with tbp
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 63-186 124 1-62, 187-768 62 582 knot
Chain Sequence
LNTAQSKVLKGYTTDELVSQIKEYVDFTPYILKQTYRLLCGQASEDRRNGARILRSLMFQFKLVTDFKIEYKESSSIYLSSTGEQFNVQAPSIQEQKRMVRKIAKLEHVEANFLSDIDFKAGS------------PIENVLDFFEQISDNLLSYEWYKRHGAFLAFAAMFSEIDIQIRVDSKLFSK----IYEILVTDKFNDFVDDRTVAPVRDAAAYLLSRIYPLIGPNDIIEQLVGFLDSGDWQVQFSGLIALGYLKEFVEDKDGLCRKLVSLLSSPDEDIKLLSAELLCHFPITDSLDLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIFPCFTSPVPEVRTSILNMVKNLSEESIDFLVAEVVLIEEKDEIREMAIKLLKKRRDLPKNLILHFMNVIGGSLYEPYSEDDFVSYEDLYFTKSGINVVGKDEILKNRCLLFECIMKSGLPDLQSTIETTTSRTFISLYRSVQALVKDTPYTPANIEELEYYFDRCKDLKMAPLKEFKKKLSAPGIRSIHPMVDPLYSDYTRMVASIEFPGLERATALFEVETCKQFLHLFSKMITEYYDAEKISIDNFLLKAYEGLASGKDGFLSFFEVFNTRLLAHSFFHKIGSLENRLDFFSKTIHIYTKTSQIQKIGFVFDDALREKNITVINGFMRSLEFNEKFVRKALEDLDVELLDAVLMSGDHSFNPLFVKPLLRNISGNIDREASSKVLSKVIPTLGFSTNTKISKDLLEMIEREKKSLESL
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 61-201 141 1-60, 202-752 60 551 knot
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3.1 58-181 124 1-57 200-752 182-199 57 553 slipknot
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3.1 61-181 121 1-57, 200-752 58-60, 182-199 57 553 slipknot
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3.1 61-199 139 1-31, 202-752 32-60, 200-201 31 551 slipknot
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3.1 62-181 120 182-752 1-60 61-61 60 570 slipknot
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2.1 63-166 104 1-49, 185-752 50-62, 167-184 49 568 slipknot
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3.1 63-185 123 186-752 1-61 62-62 61 566 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling