| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 49-221 | 173 | 222-456 | 1-30 | 31-48 | 30 | 234 | slipknot | ||
| view details |
 |
41 | 26-260 | 235 | 1-25 | 302-456 | 261-301 | 25 | 155 | slipknot |
Chain Sequence |
SLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 23-254 | 232 | 1-22 | 274-456 | 255-273 | 22 | 183 | slipknot | ||
| view details |
 |
4.1 | 19-273 | 255 | 1-18 | 294-456 | 274-293 | 18 | 163 | slipknot | ||
| view details |
|
3.2 | 20-289 | 270 | 1-2, 304-456 | 3-19, 290-303 | 2 | 153 | slipknot | |||
| view details |
|
3.2 | 20-303 | 284 | 1-2, 305-456 | 3-19, 304-304 | 2 | 152 | slipknot | |||
| view details |
|
4.1 | 33-280 | 248 | 1-18, 301-456 | 19-32, 281-300 | 18 | 156 | slipknot | |||
| view details |
|
3.2 | 32-300 | 269 | 1-19, 304-456 | 20-31, 301-303 | 19 | 153 | slipknot | |||
| view details |
|
3.2 | 30-271 | 242 | 1-22, 278-456 | 23-29, 272-277 | 22 | 179 | slipknot | |||
| view details |
 |
2.3 | 31-259 | 229 | 1-24, 266-456 | 25-30, 260-265 | 24 | 191 | slipknot | |||
| view details |
 |
2.1 | 49-217 | 169 | 1-25, 244-456 | 26-48, 218-243 | 25 | 213 | slipknot | |||
| view details |
|
2.1 | 33-311 | 279 | 1-26, 333-456 | 27-32, 312-332 | 26 | 124 | slipknot | |||
| view details |
|
2.1 | 57-343 | 287 | 344-456 | 1-29 | 30-56 | 29 | 112 | slipknot | ||
| view details |
 |
1.1 | 52-242 | 191 | 1-37, 261-456 | 38-51, 243-260 | 37 | 196 | slipknot | |||
| view details |
|
2.1 | 44-301 | 258 | 1-37, 307-456 | 38-43, 302-306 | 37 | 150 | slipknot | |||
| view details |
|
1.1 | 54-242 | 189 | 1-51, 260-456 | 52-53, 243-259 | 51 | 197 | slipknot | |||
| view details |
 |
3.1 | 57-242 | 186 | 1-53, 261-456 | 54-56, 243-260 | 53 | 196 | slipknot | |||
| view details |
|
2.1 | 55-224 | 170 | 1-49, 239-456 | 50-54, 225-238 | 49 | 218 | slipknot | |||
| view details |
|
2.1 | 55-314 | 260 | 1-49, 339-456 | 50-54, 315-338 | 49 | 118 | slipknot |
| sequence length |
456
|
| structure length |
456
|
| publication title |
Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
HYDANTOIN TRANSPORT PROTEIN
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 174
|
| ec nomenclature | |
| pdb deposition date | 2014-05-01 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
