| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 53-320 | 268 | 1-52 | 367-411 | 321-366 | 52 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 45-309 | 265 | 1-44 | 330-411 | 310-329 | 44 | 82 | slipknot | ||
| view details |
|
2.1 | 40-331 | 292 | 1-39 | 349-411 | 332-348 | 39 | 63 | slipknot | ||
| view details |
|
2.1 | 43-353 | 311 | 1-42 | 370-411 | 354-369 | 42 | 42 | slipknot | ||
| view details |
|
2.1 | 43-329 | 287 | 1-31, 333-411 | 32-42, 330-332 | 31 | 79 | slipknot | |||
| view details |
|
2.1 | 45-330 | 286 | 1-42, 333-411 | 43-44, 331-332 | 42 | 79 | slipknot | |||
| view details |
 |
1.1 | 52-333 | 282 | 1-41, 342-411 | 42-51, 334-341 | 41 | 70 | slipknot | |||
| view details |
|
1.1 | 56-359 | 304 | 1-42, 369-411 | 43-55, 360-368 | 42 | 43 | slipknot | |||
| view details |
|
1.1 | 62-332 | 271 | 1-47, 346-411 | 48-61, 333-345 | 47 | 66 | slipknot | |||
| view details |
|
1.1 | 63-357 | 295 | 1-51, 370-411 | 52-62, 358-369 | 51 | 42 | slipknot | |||
| view details |
|
1.1 | 64-312 | 249 | 1-51, 325-411 | 52-63, 313-324 | 51 | 87 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
