| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 53-320 | 268 | 1-52 | 367-411 | 321-366 | 52 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 43-310 | 268 | 1-42 | 329-411 | 311-328 | 42 | 83 | slipknot | ||
| view details |
|
2.1 | 41-330 | 290 | 1-40 | 347-411 | 331-346 | 40 | 65 | slipknot | ||
| view details |
|
2.1 | 42-353 | 312 | 1-41 | 371-411 | 354-370 | 41 | 41 | slipknot | ||
| view details |
|
2.1 | 60-314 | 255 | 1-42, 326-411 | 43-59, 315-325 | 42 | 86 | slipknot | |||
| view details |
 |
1.1 | 60-325 | 266 | 1-42, 327-411 | 43-59, 326-326 | 42 | 85 | slipknot | |||
| view details |
 |
3.1 | 58-326 | 269 | 1-47, 336-411 | 48-57, 327-335 | 47 | 76 | slipknot | |||
| view details |
|
1.1 | 63-331 | 269 | 1-50, 343-411 | 51-62, 332-342 | 50 | 69 | slipknot | |||
| view details |
|
1.1 | 63-342 | 280 | 1-50, 347-411 | 51-62, 343-346 | 50 | 65 | slipknot | |||
| view details |
|
2.1 | 63-325 | 263 | 1-57, 332-411 | 58-62, 326-331 | 57 | 80 | slipknot | |||
| view details |
|
1.1 | 64-358 | 295 | 1-52, 369-411 | 53-63, 359-368 | 52 | 43 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| E | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
