| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 49-324 | 276 | 1-48 | 339-413 | 325-338 | 48 | 75 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGT
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 45-312 | 268 | 1-44 | 344-413 | 313-343 | 44 | 70 | slipknot | ||
| view details |
|
2.1 | 20-359 | 340 | 1-7, 369-413 | 8-19, 360-368 | 7 | 45 | slipknot | |||
| view details |
|
2.1 | 60-313 | 254 | 1-46, 327-413 | 47-59, 314-326 | 46 | 87 | slipknot | |||
| view details |
|
2.1 | 56-326 | 271 | 1-46, 333-413 | 47-55, 327-332 | 46 | 81 | slipknot | |||
| view details |
|
2.1 | 54-332 | 279 | 1-47, 335-413 | 48-53, 333-334 | 47 | 79 | slipknot | |||
| view details |
 |
1.1 | 62-331 | 270 | 1-49, 344-413 | 50-61, 332-343 | 49 | 70 | slipknot | |||
| view details |
|
1.1 | 62-343 | 282 | 1-49, 345-413 | 50-61, 344-344 | 49 | 69 | slipknot | |||
| view details |
|
2.1 | 58-328 | 271 | 1-55, 332-413 | 56-57, 329-331 | 55 | 82 | slipknot |
| sequence length |
413
|
| structure length |
413
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-25 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
