5AJ9A

G7 mutant of pas, arylsulfatase from pseudomonas aeruginosa
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 7-315 309 1-6 384-526 316-383 6 143 slipknot
Chain Sequence
KRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASA-SPTRSMLLTGTDHHIAGLGTVAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLDFLDRHYDNSLENIGSANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWGLFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSDTGVVE
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 8-318 311 1-7 354-525 319-353 7 172 slipknot
view details
3.1 4-369 366 1-3 377-525 370-376 3 149 slipknot
view details
2.1 5-380 376 1-4 384-525 381-383 4 142 slipknot
view details
2.1 9-327 319 1-7, 331-525 8-8, 328-330 7 195 slipknot
sequence length 526
structure length 525
publication title Arylsulfatase from Pseudomonas Aeruginosa
rcsb
molecule tags Hydrolase
molecule keywords ARYLSULFATASE
source organism Pseudomonas aeruginosa
missing residues 49
ec nomenclature
pdb deposition date 2015-02-20
KnotProt deposition date 2016-03-20
Image from the rcsb pdb (www.rcsb.org)
1HDHA 4CYRA 4CYSA 4CXKA 5AJ9A 4CXUA 4CXSA
similar chains in the KnotProt database (40% sequence similarity)
1HDHB 4CYRB 4CYSB 4CXKB 5AJ9B 4CXUB 4CXSB
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 1HDH A;  4CYR A;  4CYS A;  4CXK A;  5AJ9 A;  4CXU A;  4CXS A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 1HDH B;  4CYR B;  4CYS B;  4CXK B;  5AJ9 B;  4CXU B;  4CXS B; 
           

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