5GAOE

Head region of the yeast spliceosomal u4/u6.u5 tri-snrnp
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 91-194 104 1-90, 195-338 90 144 knot
Chain Sequence
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEAYKKLSQKFHGTKSNKK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 68-197 130 1-67, 198-338 67 141 knot
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3.1 69-196 128 1-45, 332-338 46-68, 197-331 45 7 slipknot
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2.1 81-196 116 1-68, 332-338 69-80, 197-331 68 7 slipknot
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2.1 81-331 251 332-338 1-67 68-80 67 6 slipknot
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3.1 87-197 111 198-338 1-80 81-86 80 140 slipknot
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3.1 88-198 111 199-338 1-86 87-87 86 139 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling