5H5FA

The crystal structure of the yeast arginine methyltransferase sfm1 complexed with sam
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 101-149 49 1-100, 150-224 100 75 knot
Chain Sequence
SHHHHHHLEVLFQGPHMASKYIIEHMEEGFSEWVILEYSQILREVGAENLILSSLPESTTEKDIPQRLLKLGLRWTTKDLKGINEDFKDLELLKDGRVCLLDPRATIDLQPEDATKFDYFVFGGILGDHPPRDRTKELKTAYPNLLISRRLGDKQMTTDTAIRTTQLIIKDRIAFEDIKFIDYPEFRFNKNEATEMPFRYVLDKEGKPILPEGMLDLIKKDSAQ
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 101-150 50 1-100, 151-224 100 74 knot
view details
2.1 97-146 50 1-96 152-224 147-151 96 73 slipknot
sequence length 224
structure length 224
publication title A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
pubmed doi rcsb
molecule tags Transferase
molecule keywords Protein arginine N-methyltransferase SFM1
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
ec nomenclature
pdb deposition date 2016-11-05
KnotProt deposition date 2017-01-23
Image from the rcsb pdb (www.rcsb.org)
5H5FA 5C74A 5H5EA 5C77A
similar chains in the KnotProt database (40% sequence similarity)
5C74B 5C77B 5H5DA
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5H5F A;  5C74 A;  5H5E A;  5C77 A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5C74 B;  5C77 B;  5H5D A; 
           

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