5JPQE

Cryo-em structure of the 90s pre-ribosome
Knot K +31
Knot core rangeKnot core lengthKnot tails rangeSlipknot tails rangeSlipknot loops rangeN-end lengthC-end lengthType
view details
+31 153-197 45 1-152, 198-225 152 28 knot
Chain Sequence
PPVLTSKDKITKRMIVVLAMASLETHKI---------YVLLNCDDHQGLLDISEARPDI-----THQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL
sequence length 225
structure length 211
publication title Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords WD40 domain proteins
missing residues 29-37, 51-55
ec nomenclature
pdb deposition date2016-05-04
KnotProt deposition date2016-07-29
Image from the rcsb pdb (www.rcsb.org)
5FAIA 3OIIA 3OINA 2V3KA 2V3JA 3OIJA 5JPQe
similar chains in the KnotProt database (40% sequence similarity)
3OIIB 3OINB 3OIJB 5WYJE1 5WYJE2 5WYKE1 5WYKE2 5TZSj 5TZSk 5JPQf
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5FAI A;  3OII A;  3OIN A;  2V3K A;  2V3J A;  3OIJ A;  5JPQ e; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 3OII B;  3OIN B;  3OIJ B;  5WYJ E1;  5WYJ E2;  5WYK E1;  5WYK E2;  5TZS j;  5TZS k;  5JPQ f; 
           

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