5KENA

Ebov gp in complex with variable fab domains of iggs c4g7 and c13c6
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 76-139 64 1-75 143-228 140-142 75 86 slipknot
Chain Sequence
IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP---------------------PSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETI
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 76-137 62 1-75 145-207 138-144 75 63 slipknot
view details
1.1 80-138 59 1-75, 144-207 76-79, 139-143 75 64 slipknot
sequence length 228
structure length 207
publication title Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
pubmed doi rcsb
molecule tags Viral protein/immune system
molecule keywords Ebola surface glycoprotein, GP1
source organism Zaire ebolavirus
missing residues 156-176
ec nomenclature
pdb deposition date 2016-06-09
KnotProt deposition date 2016-09-07
Image from the rcsb pdb (www.rcsb.org)
3S88I 3VE0I 5KENA
similar chains in the KnotProt database (40% sequence similarity)
5KENE 5KENK
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 3S88 I;  3VE0 I;  5KEN A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5KEN E;  5KEN K; 
           

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