5KENA

Ebov gp in complex with variable fab domains of iggs c4g7 and c13c6
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 76-139 64 1-75 143-228 140-142 75 86 slipknot
Chain Sequence
IPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP---------------------PSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETI
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 76-137 62 1-75 145-207 138-144 75 63 slipknot
view details
1.1 80-138 59 1-75, 144-207 76-79, 139-143 75 64 slipknot
missing residues 156-176
publication title Structures of Ebola virus GP and sGP in complex with therapeutic antibodies.
pubmed doi rcsb
structure length 207
molecule tags Viral protein/immune system
source organism Zaire ebolavirus
sequence length 228
molecule keywords Ebola surface glycoprotein, GP1
ec nomenclature
pdb deposition date 2016-06-09
KnotProt deposition date 2016-09-07
Image from the rcsb pdb (www.rcsb.org)
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