5NJ5B

E. coli microcin-processing metalloprotease tldd/e with phosphate bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 240-418 179 1-239 435-444 419-434 239 10 slipknot
Chain Sequence
VISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 75-420 346 1-74 433-444 421-432 74 12 slipknot
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3.1 99-420 322 1-74, 431-444 75-98, 421-430 74 14 slipknot
view details
3.1 113-420 308 1-85, 433-444 86-112, 421-432 85 12 slipknot
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3.1 229-420 192 1-112, 433-444 113-228, 421-432 112 12 slipknot
view details
3.1 233-420 188 1-228, 431-444 229-232, 421-430 228 14 slipknot
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
structure length 444
molecule tags Hydrolase
source organism Escherichia coli str. k-12 substr. mg1655
sequence length 444
molecule keywords Metalloprotease TldD
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
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