5NJ9A

E. coli microcin-processing metalloprotease tldd/e with drvy angiotensin fragment bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 251-439 189 1-250 470-480 440-469 250 11 slipknot
Chain Sequence
SLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSDKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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2.1 249-438 190 1-248 445-480 439-444 248 36 slipknot
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3.1 246-444 199 1-245 467-480 445-466 245 14 slipknot
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2.1 249-463 215 1-248 472-480 464-471 248 9 slipknot
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3.1 248-444 197 1-245, 464-480 246-247, 445-463 245 17 slipknot
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3.1 249-444 196 1-247, 451-480 248-248, 445-450 247 30 slipknot
view details
3.1 252-445 194 1-247, 466-480 248-251, 446-465 247 15 slipknot
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
structure length 480
molecule tags Hydrolase
source organism escherichia coli k-12
sequence length 480
molecule keywords Metalloprotease TldD
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
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