5NJAA

E. coli microcin-processing metalloprotease tldd/e with angiotensin analogue bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 251-439 189 1-250 469-480 440-468 250 12 slipknot
Chain Sequence
SLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSDKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 249-440 192 1-248 465-480 441-464 248 16 slipknot
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3.1 249-464 216 1-248 467-480 465-466 248 14 slipknot
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2.1 115-466 352 1-114 472-480 467-471 114 9 slipknot
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2.1 214-436 223 1-71, 441-480 72-213, 437-440 71 40 slipknot
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2.1 121-466 346 1-114, 471-480 115-120, 467-470 114 10 slipknot
view details
2.1 235-436 202 1-213, 441-480 214-234, 437-440 213 40 slipknot
sequence length 480
structure length 480
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Metalloprotease TldD
source organism Escherichia coli str. k-12 substr. mg1655
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
5NJ9A 5NJAA 5NJBA 5NJ5A
similar chains in the KnotProt database (40% sequence similarity)
5NJ9C 5NJCA 5NJCC 5NJAC 5NJFA 5NJFC 5NJBC 5NJ5C
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5NJ9 A;  5NJA A;  5NJB A;  5NJ5 A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5NJ9 C;  5NJC A;  5NJC C;  5NJA C;  5NJF A;  5NJF C;  5NJB C;  5NJ5 C; 
           

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