5NJAB

E. coli microcin-processing metalloprotease tldd/e with angiotensin analogue bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 240-417 178 1-239 434-443 418-433 239 10 slipknot
Chain Sequence
ISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5



Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 24-419 396 1-23 431-443 420-430 23 13 slipknot
view details
3.1 238-425 188 1-237 432-443 426-431 237 12 slipknot
view details
3.1 29-420 392 1-23, 426-443 24-28, 421-425 23 18 slipknot
view details
3.1 227-419 193 1-23, 426-443 24-226, 420-425 23 18 slipknot
view details
3.1 238-419 182 1-226, 426-443 227-237, 420-425 226 18 slipknot
sequence length 443
structure length 443
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Metalloprotease TldD
source organism Escherichia coli str. k-12 substr. mg1655
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
5NJ9B 5NJAB 5NJBB 5NJ5B 3TV9A 3QTDA
similar chains in the KnotProt database (40% sequence similarity)
5NJ9D 5NJCB 5NJCD 5NJAD 5NJFB 5NJFD 5NJBD 5NJ5D 3QTDB 3QTDC 3QTDD
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5NJ9 B;  5NJA B;  5NJB B;  5NJ5 B;  3TV9 A;  3QTD A; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5NJ9 D;  5NJC B;  5NJC D;  5NJA D;  5NJF B;  5NJF D;  5NJB D;  5NJ5 D;  3QTD B;  3QTD C;  3QTD D; 
           

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling