5NJAB

E. coli microcin-processing metalloprotease tldd/e with angiotensin analogue bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 240-417 178 1-239 434-443 418-433 239 10 slipknot
Chain Sequence
ISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 24-419 396 1-23 431-443 420-430 23 13 slipknot
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3.1 238-425 188 1-237 432-443 426-431 237 12 slipknot
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3.1 29-420 392 1-23, 426-443 24-28, 421-425 23 18 slipknot
view details
3.1 227-419 193 1-23, 426-443 24-226, 420-425 23 18 slipknot
view details
3.1 238-419 182 1-226, 426-443 227-237, 420-425 226 18 slipknot
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
structure length 443
molecule tags Hydrolase
source organism Escherichia coli str. k-12 substr. mg1655
sequence length 443
molecule keywords Metalloprotease TldD
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
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