5NJBA

E. coli microcin-processing metalloprotease tldd/e with actinonin bound
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 251-439 189 1-250 470-480 440-469 250 11 slipknot
Chain Sequence
SLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSDKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 245-441 197 1-244 467-480 442-466 244 14 slipknot
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3.1 246-441 196 1-244, 466-480 245-245, 442-465 244 15 slipknot
view details
3.1 250-441 192 1-245, 466-480 246-249, 442-465 245 15 slipknot
publication title The Origins of Specificity in the Microcin-Processing Protease TldD/E.
pubmed doi rcsb
structure length 480
molecule tags Hydrolase
source organism Escherichia coli k-12
sequence length 480
molecule keywords Metalloprotease TldD
ec nomenclature
pdb deposition date 2017-03-28
KnotProt deposition date 2017-10-04
Image from the rcsb pdb (www.rcsb.org)
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