5OOMS

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rrna
Knot K -31
Knot core rangeKnot core lengthKnot tails rangeSlipknot tails rangeSlipknot loops rangeN-end lengthC-end lengthType
view details
-31 193-255 63 1-192, 256-390 192 135 knot
Chain Sequence
VARYPPIVASMTADSKAARLRRIERWQATVHAAESVDEKLRILTKMQFMKYMVYPQTFALNADRWYQYFTKTVFLSGLP--------------------AALRAVACDCLLQEHFYLRRRRRVHRYEESEVISLPFLDQLVSTLVGLLSPHNPALAAAALDYRCPVHFYWVRGEEIIPRGHRRGRIDDLRYQIDDKPNNQIRISKQLAEFVPLDYSVPIEIPTIKCKPDKLPLFKRQYENHIFVGSKTADPCCYGHTQFHLLPDKLRRERLLRQNCADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKPLYETIEDNDVKGFNDDVLLQIVHFLLNRPK
sequence length 390
structure length 370
publication title Structures of the human mitochondrial ribosome in native states of assembly
doi rcsb
molecule tags Ribosome
molecule keywords 16S ribosomal RNA
missing residues 80-99
ec nomenclature
pdb deposition date2017-08-08
KnotProt deposition date2017-09-13
Image from the rcsb pdb (www.rcsb.org)
5OOMs 4V1Aw 3J7Ys
similar chains in the KnotProt database (40% sequence similarity)
5OOLs 5AJ4Bw 3J9Ms
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5OOM s;  4V1A w;  3J7Y s; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 5OOL s;  5AJ4 Bw;  3J9M s; 
           

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