| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 42-273 | 232 | 1-24, 544-544 | 25-41, 274-543 | 24 | 1 | slipknot | |||
| view details |
 |
41 | 19-305 | 287 | 1-18 | 364-544 | 306-363 | 18 | 181 | slipknot |
Chain Sequence |
GSQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICAQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 15-301 | 287 | 1-14 | 313-544 | 302-312 | 14 | 232 | slipknot | ||
| view details |
 |
4.1 | 16-311 | 296 | 1-15 | 325-544 | 312-324 | 15 | 220 | slipknot | ||
| view details |
|
4.1 | 16-324 | 309 | 1-15 | 338-544 | 325-337 | 15 | 207 | slipknot | ||
| view details |
|
3.2 | 23-348 | 326 | 1-4, 364-544 | 5-22, 349-363 | 4 | 181 | slipknot | |||
| view details |
 |
2.1 | 25-276 | 252 | 1-19, 286-544 | 20-24, 277-285 | 19 | 259 | slipknot | |||
| view details |
|
2.1 | 26-384 | 359 | 1-20, 397-544 | 21-25, 385-396 | 20 | 148 | slipknot | |||
| view details |
|
2.1 | 45-425 | 381 | 426-544 | 1-20 | 21-44 | 20 | 118 | slipknot | ||
| view details |
|
2.1 | 46-369 | 324 | 1-21, 409-544 | 22-45, 370-408 | 21 | 136 | slipknot | |||
| view details |
 |
1.1 | 40-293 | 254 | 1-22, 308-544 | 23-39, 294-307 | 22 | 237 | slipknot | |||
| view details |
|
2.1 | 38-271 | 234 | 1-23, 292-544 | 24-37, 272-291 | 23 | 253 | slipknot | |||
| view details |
|
1.1 | 34-259 | 226 | 1-27, 269-544 | 28-33, 260-268 | 27 | 276 | slipknot | |||
| view details |
|
1.1 | 45-291 | 247 | 1-30, 309-544 | 31-44, 292-308 | 30 | 236 | slipknot | |||
| view details |
|
1.1 | 42-257 | 216 | 1-33, 273-544 | 34-41, 258-272 | 33 | 272 | slipknot | |||
| view details |
|
2.1 | 42-411 | 370 | 1-34, 417-544 | 35-41, 412-416 | 34 | 128 | slipknot | |||
| view details |
|
2.1 | 45-274 | 230 | 1-38, 288-544 | 39-44, 275-287 | 38 | 257 | slipknot |
| sequence length |
544
|
| structure length |
544
|
| publication title |
Structural basis for recognition of diverse antidepressants by the human serotonin transporter
rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 182
|
| ec nomenclature | |
| pdb deposition date | 2017-09-06 |
| KnotProt deposition date | 2017-10-25 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
