Found 25 chains in Knotoided chains table. Displaying 1 - 25. Applied filters: Probabilistic

Search results query: topological notation for knotoids: S 4.1, 3.2, 3.1, 2.1, 1.1

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#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  4ain|A|2018-06-12|S|4.1 3.2 3.1 2.1 1.1;
  2wsx|A|2018-06-12|S|4.1 3.2 3.1 2.1 1.1;
  5m8k|A|2018-06-12|S|4.1 3.2 3.1 2.1 1.1;
  5m8j|A|2018-06-12|S|4.1 3.2 3.1 2.1 1.1;
  5m8a|A|2018-06-12|S|4.1 3.2 3.1 2.1 1.1;
  3usi|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  4xpt|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  4xpb|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  4m8j|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  4llh|B|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  4fy0|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3usp|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3uso|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  2jlo|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3tt3|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3qs5|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3mpn|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3hfx|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3gjc|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3f4j|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3f48|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3f3e|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  3f3c|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  2qei|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
  2qb4|A|2018-06-11|S|4.1 3.2 3.1 2.1 1.1;
Knotoid types pdb Title
S 4.1, 3.2, 3.1, 2.1, 1.1
27
4ainA Crystal structure of betp with asymmetric protomers.
S 4.1, 3.2, 3.1, 2.1, 1.1 2wsxA Crystal structure of carnitine transporter from escherichia coli
S 4.1, 3.2, 3.1, 2.1, 1.1 5m8kA Crystal structure of eremococcus coleocola manganese transporter mutant e129q
S 4.1, 3.2, 3.1, 2.1, 1.1 5m8jA Crystal structure of eremococcus coleocola manganese transporter mutant h236a
S 4.1, 3.2, 3.1, 2.1, 1.1 5m8aA Crystal structure of eremococcus coleocola manganese transporter mutant e129a
S 4.1, 3.2, 3.1, 2.1, 1.1
18
3usiA Crystal structure of leut bound to l-leucine in space group p2 from lipid bicelles
S 4.1, 3.2, 3.1, 2.1, 1.1 4xptA X-ray structure of drosophila dopamine transporter with subsiteb mutations d121g/s426m and el2 deletion of 162-201 in complex with substrate analogue 3,4 dichlorophen ethylamine
S 4.1, 3.2, 3.1, 2.1, 1.1 4xpbA X-ray structure of drosophila dopamine transporter with subsiteb mutations (d121g/s426m) bound to cocaine
S 4.1, 3.2, 3.1, 2.1, 1.1 4m8jA Crystal structure of cait r262e bound to gamma-butyrobetaine
S 4.1, 3.2, 3.1, 2.1, 1.1 4llhB Substrate bound outward-open state of the symporter betp
S 4.1, 3.2, 3.1, 2.1, 1.1
19
4fy0A Crystal structure of leut-f253a bound to l-selenomethionine from lipid bicelles
S 4.1, 3.2, 3.1, 2.1, 1.1
16
3uspA Crystal structure of leut in heptyl-beta-d-selenoglucoside
S 4.1, 3.2, 3.1, 2.1, 1.1
18
3usoA Crystal structure of leut bound to l-selenomethionine in space group p21212 from lipid bicelles
S 4.1, 3.2, 3.1, 2.1, 1.1 2jloA Structure of mhp1, a nucleobase-cation-symport-1 family transporter, in a closed conformation with benzylhydantoin
S 4.1, 3.2, 3.1, 2.1, 1.1 3tt3A Crystal structure of leut in the inward-open conformation in complex with fab
S 4.1, 3.2, 3.1, 2.1, 1.1
18
3qs5A Crystal structure of leut mutant i359q bound to sodium and l-tryptophan
S 4.1, 3.2, 3.1, 2.1, 1.1
17
3mpnA F177r1 mutant of leut
S 4.1, 3.2, 3.1, 2.1, 1.1 3hfxA Crystal structure of carnitine transporter
S 4.1, 3.2, 3.1, 2.1, 1.1 3gjcA Crystal structure of the e290s mutant of leut with bound og
S 4.1, 3.2, 3.1, 2.1, 1.1
17
3f4jA Crystal structure of leut bound to glycine and sodium
S 4.1, 3.2, 3.1, 2.1, 1.1
14
3f48A Crystal structure of leut bound to l-alanine and sodium
S 4.1, 3.2, 3.1, 2.1, 1.1
17
3f3eA Crystal structure of leut bound to l-leucine (30 mm) and sodium
S 4.1, 3.2, 3.1, 2.1, 1.1
23
3f3cA Crystal structure of leut bound to 4-fluoro-l-phenylalanine and sodium
S 4.1, 3.2, 3.1, 2.1, 1.1
18
2qeiA Crystal structure analysis of leut complexed with l-alanine, sodium, and clomipramine
S 4.1, 3.2, 3.1, 2.1, 1.1
18
2qb4A Crystal structure analysis of leut complexed with l-leucine, sodium and desipramine
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KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling