Found 21 chains in Knotted chains table. Displaying 1 - 21. Applied filters: Probabilistic

Search results query: ribosome

Hide raw data panel
#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  7qi6|5|2023-07-14|K|-3.1 -3.1 -3.1;
  6rxz|CN|2019-09-09|K|+3.1;
  6rxy|CN|2019-09-08|K|+3.1;
  6rxx|CN|2019-09-07|K|+3.1;
  6rxv|CN|2019-09-07|K|+3.1;
  6rxt|CN|2019-09-07|K|+3.1;
  6nd4|N|2019-07-29|K|-3.1;
  6hix|BG|2018-09-28|S|+3.1;
  4v7h|BE|2018-09-28|K|+3.1;
  6gaw|Ba|2018-09-14|K|-3.1 -3.1 -3.1 -3.1;
  6gaw|Bw|2018-09-14|K|-3.1 -3.1 -3.1 -3.1;
  6gb2|Bw|2018-09-13|K|-3.1 -3.1 -3.1 -3.1;
  5oql|e|2017-10-11|K|+3.1;
  5oom|s|2017-09-13|K|-3.1;
  5wyk|E1|2017-04-07|K|+3.1;
  5jpq|e|2016-07-29|K|+3.1;
  3j7y|5|2014-10-15|K|-3.1 -3.1 -3.1 -3.1;
  3j7y|s|2014-10-15|K|-3.1 -3.1 -3.1 -3.1;
  4v1a|a|2014-10-13|K|-3.1 -3.1 -3.1 -3.1;
  4v1a|w|2014-10-13|K|-3.1 -3.1 -3.1 -3.1;
  3jyw|E|2014-07-31|K|+3.1;

      
Knot types Knot loop types pdb Title
K -31 -31 -31 7qi65 Human mitochondrial ribosome in complex with mrna, a/p- and p/e-trnas at 2.98 a resolution
K +31 6rxzCN Cryo-em structure of the 90s pre-ribosome (kre33-noc4) from chaetomium thermophilum, state b
K +31 6rxyCN Cryo-em structure of the 90s pre-ribosome (kre33-noc4) from chaetomium thermophilum, state a
K +31 6rxxCN Cryo-em structure of the 90s pre-ribosome (kre33-noc4) from chaetomium thermophilum, state c, poly-ala
K +31 6rxvCN Cryo-em structure of the 90s pre-ribosome (kre33-noc4) from chaetomium thermophilum, state b2
K +31 6rxtCN Cryo-em structure of the 90s pre-ribosome (kre33-noc4) from chaetomium thermophilum, state a
K -31 6nd4N Conformational switches control early maturation of the eukaryotic small ribosomal subunit
S +31 6hixBG Cryo-em structure of the trypanosoma brucei mitochondrial ribosome - this entry contains the large mitoribosomal subunit
K +31 4v7hBE Structure of the 80s rrna and proteins and p/e trna for eukaryotic ribosome based on cryo-em map of thermomyces lanuginosus ribosome at 8.9a resolution
K -31 -31 -31 -31 6gawBa Unique features of mammalian mitochondrial translation initiation revealed by cryo-em. this file contains the complete 55s ribosome.
K -31 -31 -31 -31 6gawBw Unique features of mammalian mitochondrial translation initiation revealed by cryo-em. this file contains the complete 55s ribosome.
K -31 -31 -31 -31 6gb2Bw Unique features of mammalian mitochondrial translation initiation revealed by cryo-em. this file contains the 39s ribosomal subunit.
K +31 5oqle Cryo-em structure of the 90s pre-ribosome from chaetomium thermophilum
K -31 5ooms Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rrna
K +31 5wykE1 Cryo-em structure of the 90s small subunit pre-ribosome (mtr4-depleted, enp1-tap)
K +31 5jpqe Cryo-em structure of the 90s pre-ribosome
K -31 -31 -31 -31 3j7y5 Structure of the large ribosomal subunit from human mitochondria
K -31 -31 -31 -31 3j7ys Structure of the large ribosomal subunit from human mitochondria
K -31 -31 -31 -31 4v1aa Structure of the large subunit of the mammalian mitoribosome, part 2 of 2
K -31 -31 -31 -31 4v1aw Structure of the large subunit of the mammalian mitoribosome, part 2 of 2
K +31 3jywE Structure of the 60s proteins for eukaryotic ribosome based on cryo-em map of thermomyces lanuginosus ribosome at 8.9a resolution

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling