1CIX | KnotProt

Cysteine knot

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				Loop	Piercing
view details				4-c-11-b-29-c-24	23-b-41

Chain Sequence

YSRCQLQGFNCVVRSYGLPTIPCCRGLTCRSYFPGSTYGRCQRY

sequence length	44
structure length	44
publication title	Structure of the antimicrobial peptide tachystatin A. pubmed doi rcsb
molecule tags	Antimicrobial peptide
molecule keywords	PROTEIN (TACHYSTATIN A)
ec nomenclature
pdb deposition date	1999-04-06

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.40.20	Few Secondary Structures	Irregular	Omega-AgatoxinV	Omega-AgatoxinV	1cixA00

2DCWA 2DCVA 1CIXA
chains in the KnotProt database with same CATH superfamily

1G9PA 1OAVA 1OAWA 2DCVA 2DCWA 1AGGA 1IVAA 1VTXA 2ROOA 1OMBA 1CIXA 1QDPA 1OMAA
chains in the KnotProt database with same CATH topology

1G9PA 1OAVA 1OAWA 2DCVA 2DCWA 1AGGA 1IVAA 1VTXA 2ROOA 1OMBA 1CIXA 1QDPA 1OMAA
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 2DCW A;  2DCV A;  1CIX A; 
#chains in the KnotProt database with same CATH topology
 1G9P A;  1OAV A;  1OAW A;  2DCV A;  2DCW A;  1AGG A;  1IVA A;  1VTX A;  2ROO A;  1OMB A;  1CIX A;  1QDP A;  1OMA A; 
#chains in the KnotProt database with same CATH homology
 1G9P A;  1OAV A;  1OAW A;  2DCV A;  2DCW A;  1AGG A;  1IVA A;  1VTX A;  2ROO A;  1OMB A;  1CIX A;  1QDP A;  1OMA A;

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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#similar chains, but unknotted
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