1G9P | KnotProt

Cysteine knot

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Help Cysteine knot data interpretation Full screen

				Loop	Piercing
view details				4-c-11-b-24-c-18	17-b-29

Chain Sequence

LLACLFGNGRCSSNRDCCELTPVCKRGSCVSSGPGLVGGILGGIL

sequence length	45
structure length	45
publication title	Discovery and structure of a potent and highly specific blocker of insect calcium channels. pubmed rcsb
molecule tags	Toxin
molecule keywords	OMEGA-ATRACOTOXIN-HV2A
ec nomenclature
pdb deposition date	2000-11-27

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.40.10	Few Secondary Structures	Irregular	Omega-AgatoxinV	Omega-AgatoxinV	1g9pA00

1OAVA 1QDPA 2ROOA 1G9PA 1IVAA 1OMAA 1OAWA 1AGGA 1VTXA 1OMBA
chains in the KnotProt database with same CATH superfamily

1OAVA 1QDPA 2ROOA 2DCWA 1G9PA 1IVAA 1OMAA 1OAWA 1AGGA 1VTXA 2DCVA 1CIXA 1OMBA
chains in the KnotProt database with same CATH topology

1OAVA 1QDPA 2ROOA 2DCWA 1G9PA 1IVAA 1OMAA 1OAWA 1AGGA 1VTXA 2DCVA 1CIXA 1OMBA
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 1OAV A;  1QDP A;  2ROO A;  1G9P A;  1IVA A;  1OMA A;  1OAW A;  1AGG A;  1VTX A;  1OMB A; 
#chains in the KnotProt database with same CATH topology
 1OAV A;  1QDP A;  2ROO A;  2DCW A;  1G9P A;  1IVA A;  1OMA A;  1OAW A;  1AGG A;  1VTX A;  2DCV A;  1CIX A;  1OMB A; 
#chains in the KnotProt database with same CATH homology
 1OAV A;  1QDP A;  2ROO A;  2DCW A;  1G9P A;  1IVA A;  1OMA A;  1OAW A;  1AGG A;  1VTX A;  2DCV A;  1CIX A;  1OMB A;

1HP3A
similar chains in the KnotProt database (40% sequence similarity)

None
similar chains in the pdb database (40% sequence similarity)

#similar chains in the KnotProt database (40% sequence similarity)
1HP3 A; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)