1OMAA

Sequential assignment and structure determination of spider toxin omega-aga-ivb
Cysteine knot
Loop Piercing
view details
4-c-12-b-25-c-20 19-b-36
Chain Sequence
EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGLSFA
sequence length 48
structure length 48
publication title Sequential assignment and structure determination of spider toxin omega-Aga-IVB.
pubmed doi rcsb
molecule tags Toxin
molecule keywords OMEGA-AGA-IVB
source organism Agelenopsis aperta
ec nomenclature
pdb deposition date 1993-09-09
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.40.10 Few Secondary Structures Irregular Omega-AgatoxinV Omega-AgatoxinV 1omaA00
1OAWA 1OAVA 1OMBA 1G9PA 2ROOA 1IVAA 1OMAA 1AGGA 1VTXA 1QDPA
chains in the KnotProt database with same CATH superfamily
1OAWA 1OAVA 1OMBA 2DCWA 1G9PA 2ROOA 1IVAA 1QDPA 1OMAA 1AGGA 1VTXA 1CIXA 2DCVA
chains in the KnotProt database with same CATH topology
1OAWA 1OAVA 1OMBA 2DCWA 1G9PA 2ROOA 1IVAA 1QDPA 1OMAA 1AGGA 1VTXA 1CIXA 2DCVA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1OAW A;  1OAV A;  1OMB A;  1G9P A;  2ROO A;  1IVA A;  1OMA A;  1AGG A;  1VTX A;  1QDP A; 
#chains in the KnotProt database with same CATH topology
 1OAW A;  1OAV A;  1OMB A;  2DCW A;  1G9P A;  2ROO A;  1IVA A;  1QDP A;  1OMA A;  1AGG A;  1VTX A;  1CIX A;  2DCV A; 
#chains in the KnotProt database with same CATH homology
 1OAW A;  1OAV A;  1OMB A;  2DCW A;  1G9P A;  2ROO A;  1IVA A;  1QDP A;  1OMA A;  1AGG A;  1VTX A;  1CIX A;  2DCV A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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