1VTX | KnotProt

Cysteine knot

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Help Cysteine knot data interpretation Full screen

				Loop	Piercing
view details				1-c-8-b-20-c-15	14-b-31

Chain Sequence

CAKKRNWCGKTEDCCCPMKCVYAWYNEQGSCQSTISALWKKC

sequence length	42
structure length	42
publication title	The structure of versutoxin (delta-atracotoxin-Hv1) provides insights into the binding of site 3 neurotoxins to the voltage-gated sodium channel. pubmed doi rcsb
molecule tags	Neurotoxin
molecule keywords	DELTA-ATRACOTOXIN-HV1
ec nomenclature
pdb deposition date	1997-03-13

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.40.10	Few Secondary Structures	Irregular	Omega-AgatoxinV	Omega-AgatoxinV	1vtxA00

1OMAA 1VTXA 1AGGA 1OMBA 1IVAA 1OAWA 1OAVA 2ROOA 1QDPA 1G9PA
chains in the KnotProt database with same CATH superfamily

1OMAA 1VTXA 1AGGA 1OMBA 1IVAA 1CIXA 1OAWA 1OAVA 2ROOA 2DCWA 2DCVA 1QDPA 1G9PA
chains in the KnotProt database with same CATH topology

1OMAA 1VTXA 1AGGA 1OMBA 1IVAA 1CIXA 1OAWA 1OAVA 2ROOA 2DCWA 2DCVA 1QDPA 1G9PA
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 1OMA A;  1VTX A;  1AGG A;  1OMB A;  1IVA A;  1OAW A;  1OAV A;  2ROO A;  1QDP A;  1G9P A; 
#chains in the KnotProt database with same CATH topology
 1OMA A;  1VTX A;  1AGG A;  1OMB A;  1IVA A;  1CIX A;  1OAW A;  1OAV A;  2ROO A;  2DCW A;  2DCV A;  1QDP A;  1G9P A; 
#chains in the KnotProt database with same CATH homology
 1OMA A;  1VTX A;  1AGG A;  1OMB A;  1IVA A;  1CIX A;  1OAW A;  1OAV A;  2ROO A;  2DCW A;  2DCV A;  1QDP A;  1G9P A;

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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