1CIX | KnotProt

Cysteine knot

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				Loop	Piercing
view details				4-c-11-b-29-c-24	23-b-41

Chain Sequence

YSRCQLQGFNCVVRSYGLPTIPCCRGLTCRSYFPGSTYGRCQRY

sequence length	44
structure length	44
publication title	Structure of the antimicrobial peptide tachystatin A. pubmed doi rcsb
molecule tags	Antimicrobial peptide
molecule keywords	PROTEIN (TACHYSTATIN A)
ec nomenclature
pdb deposition date	1999-04-06

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.40.20	Few Secondary Structures	Irregular	Omega-AgatoxinV	Omega-AgatoxinV	1cixA00

1CIXA 2DCWA 2DCVA
chains in the KnotProt database with same CATH superfamily

1CIXA 1AGGA 1QDPA 1G9PA 1OMBA 1OMAA 1OAVA 2DCVA 2DCWA 1IVAA 1VTXA 2ROOA 1OAWA
chains in the KnotProt database with same CATH topology

1CIXA 1AGGA 1QDPA 1G9PA 1OMBA 1OMAA 1OAVA 2DCVA 2DCWA 1IVAA 1VTXA 2ROOA 1OAWA
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 1CIX A;  2DCW A;  2DCV A; 
#chains in the KnotProt database with same CATH topology
 1CIX A;  1AGG A;  1QDP A;  1G9P A;  1OMB A;  1OMA A;  1OAV A;  2DCV A;  2DCW A;  1IVA A;  1VTX A;  2ROO A;  1OAW A; 
#chains in the KnotProt database with same CATH homology
 1CIX A;  1AGG A;  1QDP A;  1G9P A;  1OMB A;  1OMA A;  1OAV A;  2DCV A;  2DCW A;  1IVA A;  1VTX A;  2ROO A;  1OAW A;

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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#similar chains, but unknotted
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