1GJJA

N-terminal constant region of the nuclear envelope protein lap2
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
  • Chain breaks within knot 51 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
  • Chain breaks within knot 71 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Slipknot S 7.4 51 +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 43-113 71 1-42, 114-153 42 39 slipknot
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51 21-122 102 1-20, 123-153 20 30 slipknot
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71 17-125 109 1-16, 126-153 16 27 slipknot
Chain Sequence
MPEFLEDPSVLTKDKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNR------------------------------------------------------------DVTELTNEDLLDQLVKYGVNPGPIVGTTRKLYEKKLLKLREQG
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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7.1 8-131 124 1-7 139-153 132-138 7 15 slipknot
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6.19 16-131 116 1-10, 146-153 11-15, 132-145 10 8 slipknot
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4.3m 21-134 114 1-15, 148-153 16-20, 135-147 15 6 slipknot
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2.1 33-147 115 1-21, 153-153 22-32, 148-152 21 1 slipknot
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2.1 43-148 106 149-153 1-32 33-42 32 4 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling