| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 192-231 | 40 | 1-191, 232-263 | 191 | 32 | knot |
Chain Sequence |
MRITSTANPRIKELARLLERKHRDSQRRFLIEGAREIERALQAGIELEQALVWEGGLNPEEQQVYAAL-----LALLEVSEAVLKKLSVRDNPAGLIALARMPERTLEEYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLVAGGVDLYSPQVIRNSTGVVFSLRTLAASESEVLDWIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYEALRQRLL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 191-234 | 44 | 1-190, 235-263 | 190 | 29 | knot |
| sequence length |
263
|
| structure length |
258
|
| publication title |
An enzyme with a deep trefoil knot for the active-site architecture.
pubmed doi rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
RNA 2'-O-RIBOSE METHYLTRANSFERASE
|
| source organism |
Thermus thermophilus
|
| missing residues |
69-73
|
| total genus |
 Genus: 81
|
| ec nomenclature |
ec
2.1.1.-: ec 2.1.1.-: |
| pdb deposition date | 2001-05-02 |
| KnotProt deposition date | 2021-04-19 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00588 | SpoU_methylase | SpoU rRNA Methylase family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
