1ZGVA

Thrombin in complex with an oxazolopyridine inhibitor 2
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 64
Slipknot S +31

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 27-238 212 1-26 250-287 239-249 26 38 slipknot
Chain Sequence
DCGLRPLFEKKSLEDKTERELLESYI---IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKEGQP--------SVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1m 27-228 202 1-26 238-276 229-237 26 39 slipknot
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2.1m 20-226 207 1-3, 229-276 4-19, 227-228 3 48 slipknot
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2.1m 25-237 213 1-3, 241-276 4-24, 238-240 3 36 slipknot
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2.1m 26-226 201 1-19, 229-276 20-25, 227-228 19 48 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling