2DCVA

The solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
Cysteine knot
Loop Piercing
view details
4-c-11-b-25-c-20 19-b-37
Chain Sequence
YVSCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF
sequence length 42
structure length 42
publication title The solution structure of horseshoe crab antimicrobial peptide tachystatin B with an inhibitory cystine-knot motif
pubmed doi rcsb
molecule tags Antimicrobial protein
molecule keywords Tachystatin-B1
ec nomenclature
pdb deposition date 2006-01-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.40.20 Few Secondary Structures Irregular Omega-AgatoxinV Omega-AgatoxinV 2dcvA00
1CIXA 2DCWA 2DCVA
chains in the KnotProt database with same CATH superfamily
1VTXA 1G9PA 1OMBA 2ROOA 1IVAA 2DCVA 1CIXA 1OAVA 2DCWA 1AGGA 1OAWA 1OMAA 1QDPA
chains in the KnotProt database with same CATH topology
1VTXA 1G9PA 1OMBA 2ROOA 1IVAA 2DCVA 1CIXA 1OAVA 2DCWA 1AGGA 1OAWA 1OMAA 1QDPA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1CIX A;  2DCW A;  2DCV A; 
#chains in the KnotProt database with same CATH topology
 1VTX A;  1G9P A;  1OMB A;  2ROO A;  1IVA A;  2DCV A;  1CIX A;  1OAV A;  2DCW A;  1AGG A;  1OAW A;  1OMA A;  1QDP A; 
#chains in the KnotProt database with same CATH homology
 1VTX A;  1G9P A;  1OMB A;  2ROO A;  1IVA A;  2DCV A;  1CIX A;  1OAV A;  2DCW A;  1AGG A;  1OAW A;  1OMA A;  1QDP A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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