2DCVA

The solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
Cysteine knot
Loop Piercing
view details
4-c-11-b-25-c-20 19-b-37
Chain Sequence
YVSCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF
sequence length 42
structure length 42
publication title The solution structure of horseshoe crab antimicrobial peptide tachystatin B with an inhibitory cystine-knot motif
pubmed doi rcsb
molecule tags Antimicrobial protein
molecule keywords Tachystatin-B1
ec nomenclature
pdb deposition date 2006-01-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.40.20 Few Secondary Structures Irregular Omega-AgatoxinV Omega-AgatoxinV 2dcvA00
2DCWA 2DCVA 1CIXA
chains in the KnotProt database with same CATH superfamily
1OMBA 2ROOA 1OMAA 1VTXA 2DCVA 1CIXA 1OAVA 1OAWA 2DCWA 1IVAA 1AGGA 1QDPA 1G9PA
chains in the KnotProt database with same CATH topology
1OMBA 2ROOA 1OMAA 1VTXA 2DCVA 1CIXA 1OAVA 1OAWA 2DCWA 1IVAA 1AGGA 1QDPA 1G9PA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 2DCW A;  2DCV A;  1CIX A; 
#chains in the KnotProt database with same CATH topology
 1OMB A;  2ROO A;  1OMA A;  1VTX A;  2DCV A;  1CIX A;  1OAV A;  1OAW A;  2DCW A;  1IVA A;  1AGG A;  1QDP A;  1G9P A; 
#chains in the KnotProt database with same CATH homology
 1OMB A;  2ROO A;  1OMA A;  1VTX A;  2DCV A;  1CIX A;  1OAV A;  1OAW A;  2DCW A;  1IVA A;  1AGG A;  1QDP A;  1G9P A; 
...loading similar chains, please wait...
similar chains in the KnotProt database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling