| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 10-214 | 205 | 1-9 | 332-382 | 215-331 | 9 | 51 | slipknot |
Chain Sequence |
TPHALLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSRLLGIPAAPNDGNPATLLPALRM
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 9-217 | 209 | 1-8 | 324-382 | 218-323 | 8 | 59 | slipknot | ||
| view details |
 |
2.1 | 8-323 | 316 | 1-2, 328-382 | 3-7, 324-327 | 2 | 55 | slipknot | |||
| view details |
|
2.1 | 9-323 | 315 | 1-7, 328-382 | 8-8, 324-327 | 7 | 55 | slipknot | |||
| view details |
|
2.1 | 12-306 | 295 | 1-8, 313-382 | 9-11, 307-312 | 8 | 70 | slipknot | |||
| view details |
|
2.1 | 12-312 | 301 | 1-8, 317-382 | 9-11, 313-316 | 8 | 66 | slipknot |
| sequence length |
382
|
| structure length |
382
|
| publication title |
Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
phosphodiesterase-nucleotide pyrophosphatase
|
| source organism |
Xanthomonas axonopodis pv. citri str. 306
|
| total genus |
 Genus: 135
|
| ec nomenclature |
ec
3.6.1.9: Nucleotide diphosphatase. |
| pdb deposition date | 2006-04-26 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01663 | Phosphodiest | Type I phosphodiesterase / nucleotide pyrophosphatase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
