| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 10-214 | 205 | 1-9 | 331-382 | 215-330 | 9 | 52 | slipknot |
Chain Sequence |
TPHALLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSRLLGIPAAPNDGNPATLLPALRM
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 9-216 | 208 | 1-8 | 323-382 | 217-322 | 8 | 60 | slipknot | ||
| view details |
|
3.1 | 7-327 | 321 | 1-6 | 333-382 | 328-332 | 6 | 50 | slipknot | ||
| view details |
 |
2.1 | 10-274 | 265 | 1-8, 283-382 | 9-9, 275-282 | 8 | 100 | slipknot | |||
| view details |
|
2.1 | 11-233 | 223 | 1-8, 239-382 | 9-10, 234-238 | 8 | 144 | slipknot |
| sequence length |
382
|
| structure length |
382
|
| publication title |
Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
phosphodiesterase-nucleotide pyrophosphatase
|
| source organism |
Xanthomonas axonopodis pv. citri str. 306
|
| total genus |
 Genus: 137
|
| ec nomenclature |
ec
3.6.1.9: Nucleotide diphosphatase. |
| pdb deposition date | 2006-04-26 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01663 | Phosphodiest | Type I phosphodiesterase / nucleotide pyrophosphatase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
