| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 10-214 | 205 | 1-9 | 332-382 | 215-331 | 9 | 51 | slipknot |
Chain Sequence |
TPHALLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSRLLGIPAAPNDGNPATLLPALRM
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 9-216 | 208 | 1-8 | 324-382 | 217-323 | 8 | 59 | slipknot | ||
| view details |
|
3.1 | 9-323 | 315 | 1-8 | 327-382 | 324-326 | 8 | 56 | slipknot | ||
| view details |
 |
2.1 | 11-280 | 270 | 1-8, 287-382 | 9-10, 281-286 | 8 | 96 | slipknot | |||
| view details |
 |
4.3m | 11-286 | 276 | 1-8, 290-382 | 9-10, 287-289 | 8 | 93 | slipknot | |||
| view details |
|
2.1 | 12-230 | 219 | 1-8, 241-382 | 9-11, 231-240 | 8 | 142 | slipknot |
| sequence length |
382
|
| structure length |
382
|
| publication title |
Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
phosphodiesterase-nucleotide pyrophosphatase
|
| source organism |
Xanthomonas axonopodis pv. citri str. 306
|
| total genus |
 Genus: 133
|
| ec nomenclature |
ec
3.6.1.9: Nucleotide diphosphatase. |
| pdb deposition date | 2006-04-26 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01663 | Phosphodiest | Type I phosphodiesterase / nucleotide pyrophosphatase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
