2J6CA

Crystal structure of afv3-109, a highly conserved protein from crenarchaeal viruses
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 3-77 75 1-2 102-109 78-101 2 8 slipknot
Chain Sequence
MLYILNSAILPLKPGEEYTVKAKEITIQEAKELVTKEQFTSAIGHQATAELLSSILGVNVPMNRVQIKVTHGDRILAFMLKQRLPEGVVVKTTEELEKIGYELWLFEIQ
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 3-82 80 1-2 88-109 83-87 2 22 slipknot
view details
3.1 2-92 91 1-1 102-109 93-101 1 8 slipknot
publication title Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses.
pubmed doi rcsb
structure length 109
molecule tags Viral protein
source organism Acidianus filamentous virus 1
sequence length 109
total genus Genus: 26
molecule keywords AFV3-109
ec nomenclature
pdb deposition date 2006-09-27
KnotProt deposition date 2014-07-31
Image from the rcsb pdb (www.rcsb.org)
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