| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
-31 | 27-119 | 93 | 1-26, 120-181 | 26 | 62 | knot |
Chain Sequence |
SDKIHH----NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYA
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
3.1m | 7-74 | 68 | 1-6, 75-136 | 6 | 62 | knot | |||
| view details |
|
 |
2.1m | 7-70 | 64 | 1-6 | 75-136 | 71-74 | 6 | 62 | slipknot |
| sequence length |
136
|
| structure length |
132
|
| publication title |
Ribonucleocapsid formation of severe acute respiratory syndrome coronavirus through molecular action of the N-terminal domain of N protein.
pubmed doi rcsb |
| molecule tags |
Viral protein
|
| molecule keywords |
Nucleocapsid protein
|
| source organism |
Sars coronavirus tor2
|
| missing residues |
7-10
|
| total genus |
 Genus: 26
|
| ec nomenclature | |
| pdb deposition date | 2007-01-04 |
| KnotProt deposition date | 2018-09-14 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00937 | Corona_nucleoca | Coronavirus nucleocapsid protein |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
