| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 10-214 | 205 | 1-9 | 331-382 | 215-330 | 9 | 52 | slipknot |
Chain Sequence |
TPHALLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSRLLGIPAAPNDGNPATLLPALRM
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 9-216 | 208 | 1-8 | 289-382 | 217-288 | 8 | 94 | slipknot | ||
| view details |
|
3.1 | 5-320 | 316 | 1-4 | 329-382 | 321-328 | 4 | 54 | slipknot | ||
| view details |
 |
2.1 | 10-270 | 261 | 1-8, 275-382 | 9-9, 271-274 | 8 | 108 | slipknot | |||
| view details |
|
2.1 | 12-248 | 237 | 1-8, 256-382 | 9-11, 249-255 | 8 | 127 | slipknot | |||
| view details |
|
2.1 | 10-258 | 249 | 1-8, 266-382 | 9-9, 259-265 | 8 | 117 | slipknot | |||
| view details |
|
2.1 | 11-273 | 263 | 1-8, 283-382 | 9-10, 274-282 | 8 | 100 | slipknot | |||
| view details |
|
2.1 | 11-290 | 280 | 1-6, 297-382 | 7-10, 291-296 | 6 | 86 | slipknot |
| sequence length |
382
|
| structure length |
382
|
| publication title |
Crystallographic Goodness of Fit: A New Treatment of Model Complexity
rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
Phosphodiesterase-nucleotide pyrophosphatase
|
| source organism |
Xanthomonas axonopodis pv. citri
|
| total genus |
 Genus: 133
|
| ec nomenclature |
ec
3.6.1.9: Nucleotide diphosphatase. |
| pdb deposition date | 2007-10-06 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01663 | Phosphodiest | Type I phosphodiesterase / nucleotide pyrophosphatase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
