2VDXA

Crystal structure of the reactive loop cleaved corticosteroid binding globulin
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
  • Chain breaks within knot 41 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 115
Slipknot S 41 -31 -31 -31 -31

  Help Knotting data interpretation Full screen
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
-31 229-335 107 336-368 1-27 28-228 27 32 slipknot
view details
41 213-349 137 1-212 360-368 350-359 212 9 slipknot
Chain Sequence
GLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTERSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNFQDWATASRQINSYVKNKTQGKIVDLFSG-DSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVGNGTVFFILPDKGKMNTVIAALSRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTTQANFSRITQDAQLKSSKVVHKAVLQLNEEGTEAAGAMFLEAIPRK-PIILRFNQPFIIMIFDHFTWSSLFLARVMNPV
Whole chain analysis

  Help Knotoid data interpretation Full screen
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


  Help Knotoid subchains data interpretation Full screen
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1m 81-333 253 1-31, 345-366 32-80, 334-344 31 22 slipknot
view details
2.1m 82-361 280 362-366 1-41 42-81 41 4 slipknot
view details
3.1m 66-344 279 1-43, 348-366 44-65, 345-347 43 19 slipknot
view details
3.1m 162-341 180 1-78, 348-366 79-161, 342-347 78 19 slipknot
view details
3.1m 170-333 164 1-81, 346-366 82-169, 334-345 81 21 slipknot
view details
2.1m 167-357 191 1-94, 366-366 95-166, 358-365 94 1 slipknot
view details
3.1m 113-365 253 366-366 1-95 96-112 95 0 slipknot
view details
3.1m 202-360 159 361-366 1-167 168-201 167 5 slipknot
view details
2.1m 179-335 157 1-169, 343-366 170-178, 336-342 169 24 slipknot
view details
2.1m 179-342 164 1-169, 344-366 170-178, 343-343 169 23 slipknot
view details
3.1m 202-357 156 1-168, 361-366 169-201, 358-360 168 6 slipknot
view details
3.1m 202-333 132 1-170, 345-366 171-201, 334-344 170 22 slipknot
view details
2.1m 203-333 131 1-201, 343-366 202-202, 334-342 201 24 slipknot
view details
2.1m 205-333 129 1-202, 343-366 203-204, 334-342 202 24 slipknot
view details
3.2m 212-348 137 1-201, 358-366 202-211, 349-357 201 9 slipknot
view details
3.2m 212-357 146 1-202, 361-366 203-211, 358-360 202 6 slipknot
view details
3.2m 218-357 140 1-209, 365-366 210-217, 358-364 209 2 slipknot
view details
3.1m 225-360 136 361-366 1-216 217-224 216 5 slipknot
view details
3.1m 226-333 108 1-218, 343-366 219-225, 334-342 218 24 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling