2W4VC

Isometrically contracting insect asynchronous flight muscle quick frozen after a quick release step
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
  • Chain breaks within knot 41 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 232
Slipknot S +31 41

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 502-759 258 760-831 1-472 473-501 472 71 slipknot
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41 471-751 281 1-470 758-831 752-757 470 74 slipknot
Chain Sequence
FSDPDFQYLAVD-------QTAAFDGKKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVEDQIIQA-------------------NPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVTKGQNMNQVVNSVGALAKSLYDRMF-------NWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAEQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE----------------------LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAH----IRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWKLYSKVKP
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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4.1 237-692 456 1-166, 700-772 167-236, 693-699 166 73 slipknot
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3.2m 435-692 258 1-418, 700-772 419-434, 693-699 418 73 slipknot
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2.1m 460-698 239 1-432, 728-772 433-459, 699-727 432 45 slipknot
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3.1m 460-727 268 1-432, 749-772 433-459, 728-748 432 24 slipknot
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3.2m 448-692 245 1-434, 699-772 435-447, 693-698 434 74 slipknot
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3.2m 449-692 244 1-447, 699-772 448-448, 693-698 447 74 slipknot
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2.1m 463-753 291 754-772 1-452 453-462 452 18 slipknot
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3.1m 465-712 248 1-459, 726-772 460-464, 713-725 459 47 slipknot
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3.1m 465-725 261 1-459, 728-772 460-464, 726-727 459 45 slipknot
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3.1m 466-738 273 1-456, 752-772 457-465, 739-751 456 21 slipknot
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2.1m 469-700 232 701-772 1-461 462-468 461 71 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling