2W5T | KnotProt

Genus: 167

Slipknot S +3₁

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Help Knotting data interpretation Full screen

					Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details				+3₁	34-256	223	1-33	291-424	257-290	33	134	slipknot

Chain Sequence

SEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGDFITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPK

Whole chain analysis

Help Knotoid data interpretation Full screen

Subchain analysis

Knotoid cutoff: 0.5

Knotoid matrix content: 1

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Help Knotoid subchains data interpretation Full screen

		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	2.1	24-256	233	1-23	263-424	257-262	23	162	slipknot
view details	3.1	34-259	226	1-33	289-424	260-288	33	136	slipknot
view details	2.1	32-257	226		1-24, 260-424	25-31, 258-259	24	165	slipknot

sequence length	424
structure length	424
publication title	Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas. pubmed doi rcsb
molecule tags	Transferase
molecule keywords	PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE
source organism	Staphylococcus aureus
total genus	Genus: 167
ec nomenclature
pdb deposition date	2008-12-11
KnotProt deposition date	2014-07-31

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00884	Sulfatase	Sulfatase

Image from the rcsb pdb (www.rcsb.org)

2W5RA 2W5SA 2W5TA 2W8DA 4UOOA 4UORA
similar chains in the KnotProt database (40% sequence similarity)

None
similar chains in the pdb database (40% sequence similarity)

#similar chains in the KnotProt database (40% sequence similarity)
2W5R A; 2W5S A; 2W5T A; 2W8D A; 4UOO A; 4UOR A; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)

2W5TA

Slipknot S +31

Chain Sequence

pfam database annotations

Slipknot S +3₁