| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 142-337 | 196 | 338-508 | 1-105 | 106-141 | 105 | 170 | slipknot | ||
| view details |
 |
41 | 103-372 | 270 | 1-102 | 426-508 | 373-425 | 102 | 83 | slipknot |
Chain Sequence |
AARGSHMKDNKKAGIEPKVFFPPLIIVGILCWLTVRDLDASNEVINAVFSYVTNVWGWAFEWYMVIMFGGWFWLVFGRYAKKRLGDEKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHVNGLFGTVVDNFYLVALILAMGTSLGLATPLVTECIQYLFGIPHTLQLDAIIISCWILLNAICVAFGLQKGVKIASDVRTYLSFLMLGWVFIVGGASFIVNYFTDSVGTLLMYMPRMLFYTDPIGKGGFPQAWTVFYWAWWVIYAIQMSIFLARISKGRTVRELCLGMVSGLTAGTWLIWTILGGNTLQLIDQNILNIPQLIDQYGVPRAIIETWAALPLSTATMWGFFILCFIATVTLINACSYTLAMSTCRSMKEGADPPLLVRIGWSVLVGIIGIILLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKVHWK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 57-374 | 318 | 1-56 | 418-508 | 375-417 | 56 | 91 | slipknot | ||
| view details |
 |
3.2 | 66-363 | 298 | 1-24, 376-508 | 25-65, 364-375 | 24 | 133 | slipknot | |||
| view details |
|
3.2 | 66-375 | 310 | 1-57, 378-508 | 58-65, 376-377 | 57 | 131 | slipknot | |||
| view details |
|
4.1 | 88-375 | 288 | 1-53, 419-508 | 54-87, 376-418 | 53 | 90 | slipknot | |||
| view details |
|
4.1 | 101-373 | 273 | 1-65, 411-508 | 66-100, 374-410 | 65 | 98 | slipknot | |||
| view details |
|
4.1 | 101-410 | 310 | 1-87, 416-508 | 88-100, 411-415 | 87 | 93 | slipknot | |||
| view details |
|
4.1 | 101-415 | 315 | 1-87, 419-508 | 88-100, 416-418 | 87 | 90 | slipknot | |||
| view details |
|
3.2 | 101-418 | 318 | 1-87, 423-508 | 88-100, 419-422 | 87 | 86 | slipknot | |||
| view details |
|
3.2 | 107-398 | 292 | 1-100, 419-508 | 101-106, 399-418 | 100 | 90 | slipknot | |||
| view details |
|
3.2 | 107-418 | 312 | 1-100, 423-508 | 101-106, 419-422 | 100 | 86 | slipknot | |||
| view details |
|
3.2 | 111-398 | 288 | 1-106, 419-508 | 107-110, 399-418 | 106 | 90 | slipknot | |||
| view details |
 |
2.1 | 127-427 | 301 | 1-104, 475-508 | 105-126, 428-474 | 104 | 34 | slipknot | |||
| view details |
|
2.1 | 138-355 | 218 | 1-116, 374-508 | 117-137, 356-373 | 116 | 135 | slipknot | |||
| view details |
 |
3.1 | 139-434 | 296 | 1-126, 455-508 | 127-138, 435-454 | 126 | 54 | slipknot | |||
| view details |
|
3.1 | 138-342 | 205 | 1-125, 356-508 | 126-137, 343-355 | 125 | 153 | slipknot | |||
| view details |
|
2.1 | 139-355 | 217 | 1-137, 370-508 | 138-138, 356-369 | 137 | 139 | slipknot | |||
| view details |
|
2.1 | 140-329 | 190 | 1-126, 342-508 | 127-139, 330-341 | 126 | 167 | slipknot | |||
| view details |
|
3.1 | 140-341 | 202 | 1-126, 356-508 | 127-139, 342-355 | 126 | 153 | slipknot | |||
| view details |
|
3.1 | 140-356 | 217 | 1-138, 359-508 | 139-139, 357-358 | 138 | 150 | slipknot | |||
| view details |
|
2.1 | 148-427 | 280 | 1-131, 482-508 | 132-147, 428-481 | 131 | 27 | slipknot | |||
| view details |
|
3.1 | 148-481 | 334 | 1-131, 485-508 | 132-147, 482-484 | 131 | 24 | slipknot | |||
| view details |
|
2.1 | 150-446 | 297 | 1-147, 485-508 | 148-149, 447-484 | 147 | 24 | slipknot | |||
| view details |
|
2.1 | 149-488 | 340 | 489-508 | 1-136 | 137-148 | 136 | 19 | slipknot |
| sequence length |
508
|
| structure length |
508
|
| publication title |
Structural Basis of Na(+)-Independent and Cooperative Substrate/Product Antiport in Cait.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
BCCT FAMILY BETAINE/CARNITINE/CHOLINE TRANSPORTER
|
| total genus |
 Genus: 203
|
| ec nomenclature | |
| pdb deposition date | 2009-09-10 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02028 | BCCT | BCCT family transporter |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
