2X4IA

Orf 114a from sulfolobus islandicus rudivirus 1
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 5-78 74 1-4 108-112 79-107 4 5 slipknot
Chain Sequence
NKVYLANAFSINMLTKFPTKVVIDKIDRLEFCENIDNEDIINSIGHDSTIQLINSLCGTTFQKNRVEIKLEKEDKLYVVQIS-------ILTLEEILKLYESGKVQFFEIIV
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 7-79 73 1-6 93-105 80-92 6 13 slipknot
missing residues 83-89
publication title The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
pubmed doi rcsb
structure length 105
molecule tags Unknown function
source organism Sulfolobus islandicus rudivirus 1 variant xx
sequence length 112
total genus Genus: 25
molecule keywords UNCHARACTERIZED PROTEIN 114
ec nomenclature
pdb deposition date 2010-01-31
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08960 DUF1874 Domain of unknown function (DUF1874)
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the pdb database (?% sequence similarity)

 
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