| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 139-181 | 43 | 1-138, 182-204 | 138 | 23 | knot |
Chain Sequence |
TYNIILAKSALELIPEEIKNKIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLNILDSPINHEKKLNIYIHTYDDKVLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEKTLEDLLNEINAKKIAIMTKTGKLTHPKLLKEYDTFIIGGFPYGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIICYSLSF
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 138-182 | 45 | 1-137, 183-204 | 137 | 22 | knot | ||||
| view details |
 |
2.1 | 33-180 | 148 | 1-32 | 186-204 | 181-185 | 32 | 19 | slipknot | ||
| view details |
|
2.1 | 136-180 | 45 | 1-33, 183-204 | 34-135, 181-182 | 33 | 22 | slipknot |
| sequence length |
204
|
| structure length |
204
|
| publication title |
The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site.
pubmed doi rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
Ribosome biogenesis protein NEP1-like
|
| source organism |
Methanocaldococcus jannaschii
|
| total genus |
 Genus: 70
|
| ec nomenclature | |
| pdb deposition date | 2007-11-09 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF03587 | EMG1 | EMG1/NEP1 methyltransferase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
