3TG0 | KnotProt

Genus: 164

Slipknot S +3₁

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Help Knotting data interpretation Full screen

					Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details				+3₁	38-359	322	1-37	411-440	360-410	37	30	slipknot

Chain Sequence

NRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGL

Whole chain analysis

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Subchain analysis

Knotoid cutoff: 0.5

Knotoid matrix content: 1

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Help Knotoid subchains data interpretation Full screen

		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	2.1	37-359	323	1-36	367-440	360-366	36	74	slipknot
view details	3.1	40-363	324	1-39	406-440	364-405	39	35	slipknot
view details	3.1	40-405	366	1-39	408-440	406-407	39	33	slipknot
view details	2.1	36-407	372	1-35	413-440	408-412	35	28	slipknot

sequence length	440
structure length	440
publication title	High-resolution analysis of Zn(2+) coordination in the alkaline phosphatase superfamily by EXAFS and x-ray crystallography. pubmed doi rcsb
molecule tags	Hydrolase
molecule keywords	Alkaline phosphatase
source organism	Escherichia coli
total genus	Genus: 164
ec nomenclature	ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date	2011-08-16
KnotProt deposition date	2014-07-31

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00245	Alk_phosphatase	Alkaline phosphatase

Image from the rcsb pdb (www.rcsb.org)

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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3TG0A

Slipknot S +31

Chain Sequence

pfam database annotations

Slipknot S +3₁