3A52A

Crystal structure of cold-active alkailne phosphatase from psychrophile shewanella sp.
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 6-271 266 1-5 367-400 272-366 5 34 slipknot
Chain Sequence
MGMIIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLLVGMASTYPARESGYVTDSAASATALATGFKSYNGAIAVDINKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNYEAIAADMLKSDADVILGGGRKYFSEALVSQFSAKGYQHITELAQLDSITQPKVLGLFAEVQLPWVIDDTDANTLSKLTQKSLDLLSQNEKGFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQHPDTLLVVTADHNTGGLSIGANGEYQWDTKLPKGISASPASIATHAIAADDWQAGVNQQLGFDVNSTELQQLTNARMQGKSTLEVALKKIIDTRSYTGWTTSGHTGVDVQVFAMGPAADLFKGNQDNTHIAEKMMSLLPKVN
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 5-272 268 1-4 282-400 273-281 4 119 slipknot
view details
3.1 6-286 281 1-5 303-400 287-302 5 98 slipknot
view details
3.1 6-304 299 1-5 310-400 305-309 5 91 slipknot
view details
3.1 7-318 312 1-6 334-400 319-333 6 67 slipknot
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3.1 6-334 329 1-5 354-400 335-353 5 47 slipknot
publication title Crystal structure of cold-active alkaline phosphatase from the psychrophile Shewanella sp.
pubmed rcsb
structure length 400
molecule tags Hydrolase
source organism Shewanella
sequence length 400
total genus Genus: 147
molecule keywords Cold-active alkaline phosphatase
ec nomenclature
pdb deposition date 2009-07-24
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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